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"This cluster of HP ProLiant DL145 servers has significantly enhanced our capability to run
high-performance message-passing parallel applications."
– Chief Technology Officer Rob Simmonds, WestGrid
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Executive summary:
WestGrid, the Western Canada Research Grid, is a $50
million collaborative project providing high-performance
computing and multimedia/visualization resources to researchers
and educators across Canada. WestGrid offers processing
power ranging from serial to large-scale parallel computation.
Researchers whose computing needs exceed the capabilities
of their own research group or department are eligible to use
WestGrid resources. The member institutions are Simon Fraser
University, the Universities of Victoria, British Columbia, Northern
British Columbia, The Banff Centre, Athabasca University, the
Universities of Alberta, Calgary, Lethbridge, Saskatchewan,
Regina, Manitoba, Winnipeg and Brandon University. The
computing resources are provided to academic researchers in
a wide range of studies including drug design to treat illnesses,
astrophysics experiments, and seismic modeling, all of which
require compute-intensive calculations.
In October of 2005, WestGrid purchased a powerful new tool
for the academic researchers in Canada. Called Matrix, this
high-performance system is actually a cluster of 128 HP ProLiant
DL145 servers each with two AMD Opteron 200 series
processors. This configuration, known as the Cluster Platform
4000 configuration is housed at the University of Calgary and
uses standards-based components and a modular buildingblock
approach to provide cost-effective, high-performance
infrastructure that is easy to implement and support.
Challenge:
Additional capacity for a wide range of high-performance
simulations across a variety of fields of study.
The types of projects running on WestGrid systems include
a wide spectrum of academic research. Examples of these
include computational chemisty projects designing new
drugs, material science projects creating polymers and
astrophysics projects simulating the creation of new galaxies.
Rob Simmonds, Chief Technology Officer at WestGrid
discusses the IT environment.
- “The researchers are using a wide range of
software applications.” “Much of the work
performed involves large numerical simulations,”
Simmonds said. There are many different forms
of simulations using different specialized codes.
The researchers are using a wide range of software
programs: from commercial codes to public domain
codes, to ones which are written by the research
groups themselves.
- “WestGrid already had a cluster that handled
message-passing applications, but demand for
this type of system was increasing,” says
Simmonds. WestGrid required a system with highperformance
processors and a high-performance
interconnect. These components allow
communications between the compute nodes to
happen in microseconds, making a significant
difference in when a job is going to be complete.
- “WestGrid provides these computing resources at
no charge to the researchers.” “It is critical to
have these types of facilities to perform these kinds
of research,” Simmonds said. WestGrid is funded
by the Canadian federal government and from
the provincial governments of Alberta and British
Columbia; therefore, a formal Request for Proposal
(RFP) process had to be followed.
Solution and results: a powerhouse 256-processor cluster
The new Matrix system is a valuable tool for researchers in
a variety of fields including physics, chemistry, the life
sciences, and energy. The system features 128 HP ProLiant
DL145 servers, each with dual AMD Opteron 200 series
processors. A Voltaire Infiniband interconnect is used as the
communications backplane and the HP Scalable File System
is deployed across all nodes. “We had a need for a system
which can achieve very high-performance message-passing
for parallel computer programs,” said Simmonds. “This type
of cluster, and Infiniband interconnect, fills that role very
well.” HP Services completed installation quickly and most
of the tools and services we required came with the system,
leaving little for us to do to integrate it into our environment.”
- “One of our main reasons for selecting HP was
that they provided a complete packaged solution
for high-performance computing,” Simmonds said.
“HP provides its own Linux software stack and
libraries required for high-performance messagepassing
and parallel computing.”
- “With 128 compute nodes doing high
performance computing, you need to get a lot
of data to and from the file servers quickly.”
The HP Scalable File System provides very
high-performance access to data. Typically
high-performance storage, constructed in a large
array, can consume a major portion of a budget.
However, the HP ProLiant DL145 servers and the
SATA drives are very affordable. When everything
is configured properly the HP ProLiant servers
deliver extraordinary performance.
- “The HP ProLiant DL145 servers with the dual
AMD Opteron 200 series processors rate well in
the high-performance world,” says Simmonds.
There are two factors when considering processors:
integer and floating point operations. When
engaged in serious number crunching, which is
what most high-performance computing is, the
operations are usually very floating point intensive.
Opteron processors rate very well on floating point
types of calculations.
- “Another advantage offered by the HP ProLiant
servers is favorable power consumption.” The
wattage draw of AMD Opteron 200 series
processors makes the HP ProLiant DL145 server
an attractive option, said Dave Kinsella, an HP
Solutions Architect who worked on the WestGrid
project. “I think the wattage draw is somewhere
in the neighborhood of 30% lower than
comparable processors,” Kinsella said. “Servers
like the HP ProLiant DL145 are well suited for highperformance
computing.”
About WestGrid:
WestGrid has approximately 1,000 users at various
universities and research institutions across Canada, all
accessing the broad array of resources at no cost. The major
computing and storage sites are connected using dedicated
network lightpaths provided by BCNet in British Columbia,
Netera Alliance in Alberta and CANARIE across Canada.
More information can be found at (http://www.westgrid.ca).
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